Total reads: 144155 Total joined: 14977 Average join len: 6.76 Stdev join len: 2.79 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 79.0% passed 14977 FASTQ recs (15.0k) 11830 Converted (11.8k, 79.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 21Mb 11235 seqs, 6412 uniques, 5958 singletons (92.9%) 00:00 21Mb Min size 1, median 1, max 1391, avg 1.75 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 454 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 4 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 85.6% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 40.1% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ46_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5FZ46_join.fq, 65.4% matched 00:00 3.3Mb 0.0% Rows 00:01 131Mb 23.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching CSM5FZ46_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching CSM5FZ46_nonchimeric.fa, 85.7% matched Total reads: 144155 Total joined: 14977 Average join len: 6.76 Stdev join len: 2.79 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 79.0% passed 14977 FASTQ recs (15.0k) 11830 Converted (11.8k, 79.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 21Mb 11235 seqs, 6412 uniques, 5958 singletons (92.9%) 00:00 21Mb Min size 1, median 1, max 1391, avg 1.75 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:01 21Mb 11.6% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:01 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 454 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 4 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 89.5% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:01 82Mb 100.0% Build index 00:01 93Mb 6.7% Search 0/1 chimeras found (0.0%) 00:01 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:01 96Mb 7.1% Writing 14 non-chimeras 00:01 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ46_join.fq, 0.0% matched 00:01 52Mb 0.2% Searching CSM5FZ46_join.fq, 0.0% matched 00:01 54Mb 100.0% Searching CSM5FZ46_join.fq, 65.3% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5FZ46_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5FZ46_nonchimeric.fa, 85.7% matched Total reads: 144155 Total joined: 14977 Average join len: 6.76 Stdev join len: 2.79 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 79.0% passed 14977 FASTQ recs (15.0k) 11830 Converted (11.8k, 79.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 21Mb 11235 seqs, 6412 uniques, 5958 singletons (92.9%) 00:00 21Mb Min size 1, median 1, max 1391, avg 1.75 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 454 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 4 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 3.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 11.8% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ46_join.fq, 0.0% matched 00:01 54Mb 2.7% Searching CSM5FZ46_join.fq, 83.9% matched 00:01 54Mb 100.0% Searching CSM5FZ46_join.fq, 65.3% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5FZ46_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5FZ46_nonchimeric.fa, 85.7% matched Total reads: 144155 Total joined: 14977 Average join len: 6.76 Stdev join len: 2.79 00:00 47Mb 0.1% Filtering 00:01 48Mb 68.0% Filtering, 95.7% passed 00:01 15Mb 100.0% Filtering, 79.0% passed 14977 FASTQ recs (15.0k) 11830 Converted (11.8k, 79.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_truncated.fa 00:00 21Mb 11235 seqs, 6412 uniques, 5958 singletons (92.9%) 00:00 21Mb Min size 1, median 1, max 1391, avg 1.75 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 454 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 4 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 85.5% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 36.6% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ46_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ46_join.fq, 0.0% matched 00:01 54Mb 71.8% Searching CSM5FZ46_join.fq, 63.9% matched 00:01 54Mb 100.0% Searching CSM5FZ46_join.fq, 65.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5FZ46_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5FZ46_nonchimeric.fa, 85.7% matched