Total reads: 76856 Total joined: 2523 Average join len: 9.39 Stdev join len: 5.07 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.3% passed 2523 FASTQ recs (2523) 2027 Converted (2027, 80.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 18Mb 1924 seqs, 1169 uniques, 1078 singletons (92.2%) 00:00 18Mb Min size 1, median 1, max 190, avg 1.65 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 91 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 23 OTUs, 3 chimeras (3.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 94.6% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 61.9% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 4.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/23 chimeras found (0.0%) 00:02 96Mb 4.3% Writing 23 non-chimeras 00:02 96Mb 100.0% Writing 23 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ4O_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5FZ4O_join.fq, 59.4% matched 00:00 3.3Mb 0.0% Rows 00:01 45Mb 7.0% Rows 00:02 502Mb 91.8% Rows 00:02 532Mb 100.0% Rows 00:02 532Mb Reading pointers...done. 00:02 534Mb Reading seqs...done. 00:03 709Mb 0.1% Searching CSM5FZ4O_nonchimeric.fa, 0.0% matched 00:03 727Mb 100.0% Searching CSM5FZ4O_nonchimeric.fa, 100.0% matched Total reads: 76856 Total joined: 2523 Average join len: 9.39 Stdev join len: 5.07 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.3% passed 2523 FASTQ recs (2523) 2027 Converted (2027, 80.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 18Mb 1924 seqs, 1169 uniques, 1078 singletons (92.2%) 00:00 18Mb Min size 1, median 1, max 190, avg 1.65 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 91 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 23 OTUs, 3 chimeras (3.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 34.3% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 31.2% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 4.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/23 chimeras found (0.0%) 00:02 96Mb 4.3% Writing 23 non-chimeras 00:02 96Mb 100.0% Writing 23 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ4O_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5FZ4O_join.fq, 59.4% matched 00:00 3.3Mb 0.0% Rows 00:01 204Mb 39.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5FZ4O_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5FZ4O_nonchimeric.fa, 100.0% matched Total reads: 76856 Total joined: 2523 Average join len: 9.39 Stdev join len: 5.07 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.3% passed 2523 FASTQ recs (2523) 2027 Converted (2027, 80.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 18Mb 1924 seqs, 1169 uniques, 1078 singletons (92.2%) 00:00 18Mb Min size 1, median 1, max 190, avg 1.65 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 91 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 23 OTUs, 3 chimeras (3.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 37.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 66.5% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 4.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/23 chimeras found (0.0%) 00:02 96Mb 4.3% Writing 23 non-chimeras 00:02 96Mb 100.0% Writing 23 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ4O_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5FZ4O_join.fq, 59.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5FZ4O_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5FZ4O_nonchimeric.fa, 100.0% matched Total reads: 76856 Total joined: 2523 Average join len: 9.39 Stdev join len: 5.07 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.3% passed 2523 FASTQ recs (2523) 2027 Converted (2027, 80.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_truncated.fa 00:00 18Mb 1924 seqs, 1169 uniques, 1078 singletons (92.2%) 00:00 18Mb Min size 1, median 1, max 190, avg 1.65 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 91 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 23 OTUs, 3 chimeras (3.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 15.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 48.8% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 4.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/23 chimeras found (0.0%) 00:02 96Mb 4.3% Writing 23 non-chimeras 00:02 96Mb 100.0% Writing 23 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5FZ4O_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5FZ4O_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5FZ4O_join.fq, 59.4% matched 00:00 3.3Mb 0.0% Rows 00:01 193Mb 37.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5FZ4O_nonchimeric.fa, 0.0% matched 00:02 727Mb 96.0% Searching CSM5FZ4O_nonchimeric.fa, 100.0% matched 00:02 727Mb 100.0% Searching CSM5FZ4O_nonchimeric.fa, 100.0% matched