Total reads: 149855 Total joined: 22072 Average join len: 6.23 Stdev join len: 1.57 00:00 48Mb 0.1% Filtering 00:01 15Mb 100.0% Filtering, 80.7% passed 22072 FASTQ recs (22.1k) 17805 Converted (17.8k, 80.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 22Mb 16860 seqs, 8283 uniques, 7578 singletons (91.5%) 00:00 22Mb Min size 1, median 1, max 2330, avg 2.04 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 7.7Mb Getting sizes 00:00 7.7Mb Sorting 705 sequences 00:00 7.7Mb 0.1% Writing output 00:00 7.7Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 24 OTUs, 1 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 61.5% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 27.0% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 4.0% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/24 chimeras found (0.0%) 00:02 96Mb 4.2% Writing 24 non-chimeras 00:02 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVB_join.fq, 0.0% matched 00:01 54Mb 13.8% Searching CSM5MCVB_join.fq, 72.4% matched 00:01 54Mb 100.0% Searching CSM5MCVB_join.fq, 71.4% matched 00:00 3.3Mb 0.0% Rows 00:01 260Mb 50.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVB_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching CSM5MCVB_nonchimeric.fa, 87.5% matched Total reads: 149855 Total joined: 22072 Average join len: 6.23 Stdev join len: 1.57 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.7% passed 22072 FASTQ recs (22.1k) 17805 Converted (17.8k, 80.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 22Mb 16860 seqs, 8283 uniques, 7578 singletons (91.5%) 00:00 22Mb Min size 1, median 1, max 2330, avg 2.04 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:01 40Mb 49.3% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:01 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:01 7.7Mb Getting sizes 00:01 7.7Mb Sorting 705 sequences 00:01 7.7Mb 0.1% Writing output 00:01 7.7Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 24 OTUs, 1 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 94.3% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:01 82Mb 100.0% Build index 00:01 94Mb 4.0% Search 0/1 chimeras found (0.0%) 00:01 96Mb 100.0% Search 0/24 chimeras found (0.0%) 00:01 96Mb 4.2% Writing 24 non-chimeras 00:01 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVB_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5MCVB_join.fq, 71.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVB_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching CSM5MCVB_nonchimeric.fa, 87.5% matched Total reads: 149855 Total joined: 22072 Average join len: 6.23 Stdev join len: 1.57 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.7% passed 22072 FASTQ recs (22.1k) 17805 Converted (17.8k, 80.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 22Mb 16860 seqs, 8283 uniques, 7578 singletons (91.5%) 00:00 22Mb Min size 1, median 1, max 2330, avg 2.04 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 7.7Mb Getting sizes 00:00 7.7Mb Sorting 705 sequences 00:00 7.7Mb 0.1% Writing output 00:00 7.7Mb 100.0% Writing output 00:01 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 45Mb 100.0% 24 OTUs, 1 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:00 26Mb 100.0% Word stats 00:00 26Mb 100.0% Alloc rows 00:00 82Mb 0.1% Build index 00:01 82Mb 0.4% Build index 00:01 82Mb 100.0% Build index 00:01 93Mb 4.0% Search 0/1 chimeras found (0.0%) 00:01 96Mb 100.0% Search 0/24 chimeras found (0.0%) 00:01 96Mb 4.2% Writing 24 non-chimeras 00:01 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVB_join.fq, 0.0% matched 00:01 54Mb 5.5% Searching CSM5MCVB_join.fq, 81.1% matched 00:01 54Mb 100.0% Searching CSM5MCVB_join.fq, 71.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVB_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching CSM5MCVB_nonchimeric.fa, 87.5% matched Total reads: 149855 Total joined: 22072 Average join len: 6.23 Stdev join len: 1.57 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 80.7% passed 22072 FASTQ recs (22.1k) 17805 Converted (17.8k, 80.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_truncated.fa 00:00 22Mb 16860 seqs, 8283 uniques, 7578 singletons (91.5%) 00:00 22Mb Min size 1, median 1, max 2330, avg 2.04 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:01 40Mb 44.7% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:01 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_derep.fa 00:01 7.7Mb Getting sizes 00:01 7.7Mb Sorting 705 sequences 00:01 7.7Mb 0.1% Writing output 00:01 7.7Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 24 OTUs, 1 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 59.8% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 70.6% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 4.0% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/24 chimeras found (0.0%) 00:02 96Mb 4.2% Writing 24 non-chimeras 00:02 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVB_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVB_join.fq, 0.0% matched 00:01 54Mb 78.3% Searching CSM5MCVB_join.fq, 70.4% matched 00:01 54Mb 100.0% Searching CSM5MCVB_join.fq, 71.4% matched 00:00 3.3Mb 0.0% Rows 00:01 501Mb 91.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVB_nonchimeric.fa, 0.0% matched 00:02 722Mb 8.8% Searching CSM5MCVB_nonchimeric.fa, 0.0% matched 00:02 728Mb 100.0% Searching CSM5MCVB_nonchimeric.fa, 87.5% matched