Total reads: 150400 Total joined: 1605 Average join len: 11.28 Stdev join len: 5.46 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.0% passed 1605 FASTQ recs (1605) 1155 Converted (1155, 72.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 18Mb 1097 seqs, 769 uniques, 718 singletons (93.4%) 00:00 18Mb Min size 1, median 1, max 103, avg 1.43 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 51 sequences 00:00 6.2Mb 2.0% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 1 chimeras (2.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:00 26Mb 100.0% Word stats 00:00 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 74.4% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 5.9% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:02 96Mb 6.2% Writing 16 non-chimeras 00:02 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVZ_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5MCVZ_join.fq, 57.2% matched 00:00 3.3Mb 0.0% Rows 00:01 276Mb 52.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVZ_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5MCVZ_nonchimeric.fa, 100.0% matched Total reads: 150400 Total joined: 1605 Average join len: 11.28 Stdev join len: 5.46 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.0% passed 1605 FASTQ recs (1605) 1155 Converted (1155, 72.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 18Mb 1097 seqs, 769 uniques, 718 singletons (93.4%) 00:00 18Mb Min size 1, median 1, max 103, avg 1.43 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 51 sequences 00:00 6.2Mb 2.0% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 1 chimeras (2.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:00 26Mb 100.0% Word stats 00:00 26Mb 100.0% Alloc rows 00:00 82Mb 0.1% Build index 00:01 82Mb 0.2% Build index 00:02 82Mb 84.6% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 5.9% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:02 96Mb 6.2% Writing 16 non-chimeras 00:02 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVZ_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5MCVZ_join.fq, 57.2% matched 00:00 3.3Mb 0.0% Rows 00:01 485Mb 89.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVZ_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5MCVZ_nonchimeric.fa, 100.0% matched Total reads: 150400 Total joined: 1605 Average join len: 11.28 Stdev join len: 5.46 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.0% passed 1605 FASTQ recs (1605) 1155 Converted (1155, 72.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 18Mb 1097 seqs, 769 uniques, 718 singletons (93.4%) 00:00 18Mb Min size 1, median 1, max 103, avg 1.43 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 51 sequences 00:00 6.2Mb 2.0% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 1 chimeras (2.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 67.2% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 84.4% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 5.9% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:02 96Mb 6.2% Writing 16 non-chimeras 00:02 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVZ_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5MCVZ_join.fq, 57.2% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:00 709Mb 0.1% Searching CSM5MCVZ_nonchimeric.fa, 0.0% matched 00:00 727Mb 100.0% Searching CSM5MCVZ_nonchimeric.fa, 100.0% matched Total reads: 150400 Total joined: 1605 Average join len: 11.28 Stdev join len: 5.46 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.0% passed 1605 FASTQ recs (1605) 1155 Converted (1155, 72.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_truncated.fa 00:00 18Mb 1097 seqs, 769 uniques, 718 singletons (93.4%) 00:00 18Mb Min size 1, median 1, max 103, avg 1.43 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 51 sequences 00:00 6.2Mb 2.0% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 1 chimeras (2.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 48Mb 34.6% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.2% Build index 00:03 82Mb 89.4% Build index 00:03 82Mb 100.0% Build index 00:03 95Mb 5.9% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:03 96Mb 6.2% Writing 16 non-chimeras 00:03 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCVZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCVZ_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5MCVZ_join.fq, 57.2% matched 00:00 3.3Mb 0.0% Rows 00:01 440Mb 78.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCVZ_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5MCVZ_nonchimeric.fa, 100.0% matched