Total reads: 158172 Total joined: 25440 Average join len: 8.50 Stdev join len: 4.61 00:00 47Mb 0.1% Filtering 00:01 48Mb 41.8% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 75.8% passed 25440 FASTQ recs (25.4k) 19287 Converted (19.3k, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:00 22Mb 18312 seqs, 11321 uniques, 10577 singletons (93.4%) 00:00 22Mb Min size 1, median 1, max 1457, avg 1.62 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.3Mb Sorting 744 sequences 00:00 8.3Mb 0.1% Writing output 00:00 8.3Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 25 OTUs, 23 chimeras (3.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 44Mb 5.6% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:02 26Mb 76.1% Word stats 00:02 26Mb 100.0% Word stats 00:02 26Mb 100.0% Alloc rows 00:02 82Mb 0.1% Build index 00:03 82Mb 60.5% Build index 00:03 82Mb 100.0% Build index 00:03 95Mb 3.8% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 1/25 chimeras found (4.0%) 00:03 96Mb 4.0% Writing 24 non-chimeras 00:03 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCW8_join.fq, 0.0% matched 00:01 54Mb 63.6% Searching CSM5MCW8_join.fq, 61.5% matched 00:01 54Mb 100.0% Searching CSM5MCW8_join.fq, 58.7% matched 00:00 3.3Mb 0.0% Rows 00:01 328Mb 60.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCW8_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5MCW8_nonchimeric.fa, 73.9% matched Total reads: 158172 Total joined: 25440 Average join len: 8.50 Stdev join len: 4.61 00:00 49Mb 0.1% Filtering 00:01 48Mb 4.5% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 75.8% passed 25440 FASTQ recs (25.4k) 19287 Converted (19.3k, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:00 22Mb 18312 seqs, 11321 uniques, 10577 singletons (93.4%) 00:00 22Mb Min size 1, median 1, max 1457, avg 1.62 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.3Mb Sorting 744 sequences 00:00 8.3Mb 0.1% Writing output 00:00 8.3Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 25 OTUs, 23 chimeras (3.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 37.5% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 43.2% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 3.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/25 chimeras found (4.0%) 00:02 96Mb 4.0% Writing 24 non-chimeras 00:02 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCW8_join.fq, 0.0% matched 00:01 54Mb 43.2% Searching CSM5MCW8_join.fq, 59.6% matched 00:01 54Mb 100.0% Searching CSM5MCW8_join.fq, 58.4% matched 00:00 3.3Mb 0.0% Rows 00:01 356Mb 64.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCW8_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5MCW8_nonchimeric.fa, 73.9% matched Total reads: 158172 Total joined: 25440 Average join len: 8.50 Stdev join len: 4.61 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 75.8% passed 25440 FASTQ recs (25.4k) 19287 Converted (19.3k, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:00 22Mb 18312 seqs, 11321 uniques, 10577 singletons (93.4%) 00:00 22Mb Min size 1, median 1, max 1457, avg 1.62 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.3Mb Sorting 744 sequences 00:00 8.3Mb 0.1% Writing output 00:00 8.3Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 25 OTUs, 23 chimeras (3.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 50.9% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 56.9% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 3.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/25 chimeras found (4.0%) 00:02 96Mb 4.0% Writing 24 non-chimeras 00:02 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCW8_join.fq, 0.0% matched 00:01 54Mb 92.8% Searching CSM5MCW8_join.fq, 58.3% matched 00:01 54Mb 100.0% Searching CSM5MCW8_join.fq, 58.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:00 709Mb 0.1% Searching CSM5MCW8_nonchimeric.fa, 0.0% matched 00:00 727Mb 100.0% Searching CSM5MCW8_nonchimeric.fa, 73.9% matched Total reads: 158172 Total joined: 25440 Average join len: 8.50 Stdev join len: 4.61 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 75.8% passed 25440 FASTQ recs (25.4k) 19287 Converted (19.3k, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:01 42Mb 73.4% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:01 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_truncated.fa 00:01 22Mb 18312 seqs, 11321 uniques, 10577 singletons (93.4%) 00:01 22Mb Min size 1, median 1, max 1457, avg 1.62 00:01 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:01 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.3Mb Sorting 744 sequences 00:00 8.3Mb 0.1% Writing output 00:00 8.3Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 25 OTUs, 23 chimeras (3.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 49.7% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 66.4% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 3.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/25 chimeras found (4.0%) 00:02 96Mb 4.0% Writing 24 non-chimeras 00:02 96Mb 100.0% Writing 24 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5MCW8_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5MCW8_join.fq, 0.0% matched 00:01 54Mb 84.4% Searching CSM5MCW8_join.fq, 59.2% matched 00:01 54Mb 100.0% Searching CSM5MCW8_join.fq, 58.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5MCW8_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5MCW8_nonchimeric.fa, 73.9% matched