Total reads: 35465 Total joined: 480 Average join len: 9.80 Stdev join len: 5.22 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 81.7% passed 480 FASTQ recs (480) 392 Converted (392, 81.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 18Mb 371 seqs, 191 uniques, 168 singletons (88.0%) 00:00 18Mb Min size 1, median 1, max 52, avg 1.94 00:00 18Mb 0.5% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 23 sequences 00:00 6.1Mb 4.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 15 OTUs, 1 chimeras (4.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 87.8% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 29.3% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 6.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/15 chimeras found (0.0%) 00:02 96Mb 6.7% Writing 15 non-chimeras 00:02 96Mb 100.0% Writing 15 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:01 6.9Mb 100.0% Alloc rows 00:01 6.9Mb 0.1% Build index 00:01 6.9Mb 100.0% Build index 00:01 40Mb 0.1% Searching CSM5YRY7_join.fq, 0.0% matched 00:01 54Mb 100.0% Searching CSM5YRY7_join.fq, 67.3% matched 00:00 3.3Mb 0.0% Rows 00:01 156Mb 28.7% Rows 00:02 328Mb 60.5% Rows 00:02 532Mb 100.0% Rows 00:02 532Mb Reading pointers...done. 00:02 534Mb Reading seqs...done. 00:03 709Mb 0.1% Searching CSM5YRY7_nonchimeric.fa, 0.0% matched 00:03 727Mb 100.0% Searching CSM5YRY7_nonchimeric.fa, 100.0% matched Total reads: 35465 Total joined: 480 Average join len: 9.80 Stdev join len: 5.22 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 81.7% passed 480 FASTQ recs (480) 392 Converted (392, 81.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 18Mb 371 seqs, 191 uniques, 168 singletons (88.0%) 00:00 18Mb Min size 1, median 1, max 52, avg 1.94 00:00 18Mb 0.5% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 23 sequences 00:00 6.1Mb 4.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 15 OTUs, 1 chimeras (4.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 10.9% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 48.4% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 6.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/15 chimeras found (0.0%) 00:02 96Mb 6.7% Writing 15 non-chimeras 00:02 96Mb 100.0% Writing 15 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5YRY7_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5YRY7_join.fq, 67.2% matched 00:00 3.3Mb 0.0% Rows 00:01 52Mb 8.7% Rows 00:02 220Mb 41.6% Rows 00:03 417Mb 73.5% Rows 00:03 532Mb 100.0% Rows 00:03 532Mb Reading pointers...done. 00:03 534Mb Reading seqs...done. 00:04 709Mb 0.1% Searching CSM5YRY7_nonchimeric.fa, 0.0% matched 00:04 727Mb 100.0% Searching CSM5YRY7_nonchimeric.fa, 100.0% matched Total reads: 35465 Total joined: 480 Average join len: 9.80 Stdev join len: 5.22 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 81.7% passed 480 FASTQ recs (480) 392 Converted (392, 81.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 18Mb 371 seqs, 191 uniques, 168 singletons (88.0%) 00:00 18Mb Min size 1, median 1, max 52, avg 1.94 00:00 18Mb 0.5% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 23 sequences 00:00 6.1Mb 4.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 15 OTUs, 1 chimeras (4.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 53Mb 64.2% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.2% Build index 00:03 82Mb 82.9% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 6.2% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/15 chimeras found (0.0%) 00:03 96Mb 6.7% Writing 15 non-chimeras 00:03 96Mb 100.0% Writing 15 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5YRY7_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5YRY7_join.fq, 67.3% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5YRY7_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching CSM5YRY7_nonchimeric.fa, 100.0% matched Total reads: 35465 Total joined: 480 Average join len: 9.80 Stdev join len: 5.22 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 81.7% passed 480 FASTQ recs (480) 392 Converted (392, 81.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_truncated.fa 00:00 18Mb 371 seqs, 191 uniques, 168 singletons (88.0%) 00:00 18Mb Min size 1, median 1, max 52, avg 1.94 00:00 18Mb 0.5% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 23 sequences 00:00 6.1Mb 4.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 15 OTUs, 1 chimeras (4.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 45.2% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 25.2% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 6.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/15 chimeras found (0.0%) 00:02 96Mb 6.7% Writing 15 non-chimeras 00:02 96Mb 100.0% Writing 15 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/CSM5YRY7_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching CSM5YRY7_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching CSM5YRY7_join.fq, 67.4% matched 00:00 3.3Mb 0.0% Rows 00:01 84Mb 14.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching CSM5YRY7_nonchimeric.fa, 0.0% matched 00:02 727Mb 47.2% Searching CSM5YRY7_nonchimeric.fa, 100.0% matched 00:02 727Mb 100.0% Searching CSM5YRY7_nonchimeric.fa, 100.0% matched