Total reads: 232605 Total joined: 27450 Average join len: 11.16 Stdev join len: 5.49 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.6% passed 27450 FASTQ recs (27.4k) 19918 Converted (19.9k, 72.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 44Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 23Mb 18840 seqs, 9767 uniques, 8908 singletons (91.2%) 00:00 23Mb Min size 1, median 1, max 1544, avg 1.93 00:00 23Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 23Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.1Mb Sorting 859 sequences 00:00 8.1Mb 0.1% Writing output 00:00 8.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 45Mb 10.0% 12 OTUs, 0 chimeras (0.0%) 00:01 46Mb 100.0% 29 OTUs, 21 chimeras (2.4%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 81.2% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 74.8% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 3.3% Search 0/1 chimeras found (0.0%) 00:02 97Mb 100.0% Search 1/29 chimeras found (3.4%) 00:02 97Mb 3.4% Writing 28 non-chimeras 00:02 97Mb 100.0% Writing 28 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEBL_join.fq, 0.0% matched 00:01 55Mb 60.6% Searching ESM5MEBL_join.fq, 71.6% matched 00:01 55Mb 100.0% Searching ESM5MEBL_join.fq, 68.9% matched 00:00 3.3Mb 0.0% Rows 00:01 271Mb 51.4% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEBL_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEBL_nonchimeric.fa, 92.9% matched Total reads: 232605 Total joined: 27450 Average join len: 11.16 Stdev join len: 5.49 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.6% passed 27450 FASTQ recs (27.4k) 19918 Converted (19.9k, 72.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 44Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 23Mb 18840 seqs, 9767 uniques, 8908 singletons (91.2%) 00:00 23Mb Min size 1, median 1, max 1544, avg 1.93 00:00 23Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 23Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:01 8.1Mb Getting sizes 00:01 8.1Mb Sorting 859 sequences 00:01 8.1Mb 0.1% Writing output 00:01 8.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 29 OTUs, 21 chimeras (2.4%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 80.8% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 78.2% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 3.3% Search 0/1 chimeras found (0.0%) 00:02 97Mb 100.0% Search 1/29 chimeras found (3.4%) 00:02 97Mb 3.4% Writing 28 non-chimeras 00:02 97Mb 100.0% Writing 28 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEBL_join.fq, 0.0% matched 00:01 55Mb 91.1% Searching ESM5MEBL_join.fq, 67.5% matched 00:01 55Mb 100.0% Searching ESM5MEBL_join.fq, 68.9% matched 00:00 3.3Mb 0.0% Rows 00:01 451Mb 81.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEBL_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEBL_nonchimeric.fa, 92.9% matched Total reads: 232605 Total joined: 27450 Average join len: 11.16 Stdev join len: 5.49 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 72.6% passed 27450 FASTQ recs (27.4k) 19918 Converted (19.9k, 72.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 44Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 23Mb 18840 seqs, 9767 uniques, 8908 singletons (91.2%) 00:00 23Mb Min size 1, median 1, max 1544, avg 1.93 00:00 23Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:01 23Mb 99.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:01 23Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.1Mb Sorting 859 sequences 00:00 8.1Mb 0.1% Writing output 00:00 8.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 29 OTUs, 21 chimeras (2.4%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 72.3% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 89.1% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 3.3% Search 0/1 chimeras found (0.0%) 00:02 97Mb 100.0% Search 1/29 chimeras found (3.4%) 00:02 97Mb 3.4% Writing 28 non-chimeras 00:02 97Mb 100.0% Writing 28 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEBL_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching ESM5MEBL_join.fq, 68.9% matched 00:00 3.3Mb 0.0% Rows 00:01 89Mb 15.2% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEBL_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEBL_nonchimeric.fa, 92.9% matched Total reads: 232605 Total joined: 27450 Average join len: 11.16 Stdev join len: 5.49 00:00 47Mb 0.1% Filtering 00:01 48Mb 19.9% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 72.6% passed 27450 FASTQ recs (27.4k) 19918 Converted (19.9k, 72.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 44Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_truncated.fa 00:00 23Mb 18840 seqs, 9767 uniques, 8908 singletons (91.2%) 00:00 23Mb Min size 1, median 1, max 1544, avg 1.93 00:00 23Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 23Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_derep.fa 00:00 8.1Mb Getting sizes 00:00 8.1Mb Sorting 859 sequences 00:00 8.1Mb 0.1% Writing output 00:00 8.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 30 OTUs, 21 chimeras (2.4%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 50Mb 44.9% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.3% Build index 00:03 82Mb 75.2% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 3.2% Search 0/1 chimeras found (0.0%) 00:03 97Mb 100.0% Search 1/30 chimeras found (3.3%) 00:03 97Mb 3.3% Writing 29 non-chimeras 00:03 97Mb 100.0% Writing 29 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEBL_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEBL_join.fq, 0.0% matched 00:01 54Mb 31.0% Searching ESM5MEBL_join.fq, 66.4% matched 00:01 54Mb 100.0% Searching ESM5MEBL_join.fq, 69.1% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEBL_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEBL_nonchimeric.fa, 93.1% matched