Total reads: 188652 Total joined: 16411 Average join len: 15.09 Stdev join len: 4.17 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.6% passed 16411 FASTQ recs (16.4k) 10600 Converted (10.6k, 64.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 20Mb 10021 seqs, 4424 uniques, 3930 singletons (88.8%) 00:00 20Mb Min size 1, median 1, max 1202, avg 2.27 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 6.9Mb Getting sizes 00:00 6.9Mb Sorting 494 sequences 00:00 6.9Mb 0.2% Writing output 00:00 6.9Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 6 chimeras (1.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 41.6% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 26.6% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:02 96Mb 2.9% Writing 35 non-chimeras 00:02 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEDZ_join.fq, 0.0% matched 00:01 55Mb 26.6% Searching ESM5MEDZ_join.fq, 78.1% matched 00:01 55Mb 100.0% Searching ESM5MEDZ_join.fq, 76.5% matched 00:00 3.3Mb 0.0% Rows 00:01 342Mb 62.8% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEDZ_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEDZ_nonchimeric.fa, 91.4% matched Total reads: 188652 Total joined: 16411 Average join len: 15.09 Stdev join len: 4.17 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.6% passed 16411 FASTQ recs (16.4k) 10600 Converted (10.6k, 64.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 20Mb 10021 seqs, 4424 uniques, 3930 singletons (88.8%) 00:00 20Mb Min size 1, median 1, max 1202, avg 2.27 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 6.9Mb Getting sizes 00:00 6.9Mb Sorting 494 sequences 00:00 6.9Mb 0.2% Writing output 00:00 6.9Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 46Mb 56.3% 29 OTUs, 1 chimeras (0.4%) 00:01 46Mb 100.0% 35 OTUs, 6 chimeras (1.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 87.2% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:01 82Mb 100.0% Build index 00:01 94Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 80.6% Search 0/29 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:02 96Mb 2.9% Writing 35 non-chimeras 00:02 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEDZ_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching ESM5MEDZ_join.fq, 76.5% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEDZ_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEDZ_nonchimeric.fa, 91.4% matched Total reads: 188652 Total joined: 16411 Average join len: 15.09 Stdev join len: 4.17 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.6% passed 16411 FASTQ recs (16.4k) 10600 Converted (10.6k, 64.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 20Mb 10021 seqs, 4424 uniques, 3930 singletons (88.8%) 00:00 20Mb Min size 1, median 1, max 1202, avg 2.27 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 6.9Mb Getting sizes 00:00 6.9Mb Sorting 494 sequences 00:00 6.9Mb 0.2% Writing output 00:00 6.9Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 6 chimeras (1.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 85.5% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 48.7% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:02 96Mb 2.9% Writing 35 non-chimeras 00:02 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEDZ_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching ESM5MEDZ_join.fq, 76.5% matched 00:00 3.3Mb 0.0% Rows 00:01 84Mb 14.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEDZ_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEDZ_nonchimeric.fa, 91.4% matched Total reads: 188652 Total joined: 16411 Average join len: 15.09 Stdev join len: 4.17 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.6% passed 16411 FASTQ recs (16.4k) 10600 Converted (10.6k, 64.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_truncated.fa 00:00 20Mb 10021 seqs, 4424 uniques, 3930 singletons (88.8%) 00:00 20Mb Min size 1, median 1, max 1202, avg 2.27 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_derep.fa 00:00 6.9Mb Getting sizes 00:00 6.9Mb Sorting 494 sequences 00:00 6.9Mb 0.2% Writing output 00:00 6.9Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 45Mb 2.2% 3 OTUs, 0 chimeras (0.0%) 00:01 46Mb 100.0% 35 OTUs, 6 chimeras (1.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 81.3% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 84.2% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:02 96Mb 2.9% Writing 35 non-chimeras 00:02 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEDZ_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEDZ_join.fq, 0.0% matched 00:01 55Mb 87.5% Searching ESM5MEDZ_join.fq, 75.4% matched 00:01 55Mb 100.0% Searching ESM5MEDZ_join.fq, 76.5% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEDZ_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEDZ_nonchimeric.fa, 91.4% matched