Total reads: 137473 Total joined: 6358 Average join len: 14.58 Stdev join len: 4.55 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 69.3% passed 6358 FASTQ recs (6358) 4409 Converted (4409, 69.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 19Mb 4180 seqs, 1997 uniques, 1791 singletons (89.7%) 00:00 19Mb Min size 1, median 1, max 439, avg 2.09 00:00 19Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 19Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 6.5Mb Getting sizes 00:00 6.5Mb Sorting 206 sequences 00:00 6.5Mb 0.5% Writing output 00:00 6.5Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 26 OTUs, 3 chimeras (1.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 50Mb 47.2% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 5.3% Build index 00:03 82Mb 93.3% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 3.7% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 1/26 chimeras found (3.8%) 00:03 96Mb 3.8% Writing 25 non-chimeras 00:03 96Mb 100.0% Writing 25 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEE2_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching ESM5MEE2_join.fq, 74.1% matched 00:00 3.3Mb 0.0% Rows 00:01 237Mb 44.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEE2_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEE2_nonchimeric.fa, 100.0% matched Total reads: 137473 Total joined: 6358 Average join len: 14.58 Stdev join len: 4.55 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 69.3% passed 6358 FASTQ recs (6358) 4409 Converted (4409, 69.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 19Mb 4180 seqs, 1997 uniques, 1791 singletons (89.7%) 00:00 19Mb Min size 1, median 1, max 439, avg 2.09 00:00 19Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 19Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 6.5Mb Getting sizes 00:00 6.5Mb Sorting 206 sequences 00:00 6.5Mb 0.5% Writing output 00:00 6.5Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 26 OTUs, 3 chimeras (1.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 29.6% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 27.8% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 3.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/26 chimeras found (3.8%) 00:02 96Mb 3.8% Writing 25 non-chimeras 00:02 96Mb 100.0% Writing 25 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEE2_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching ESM5MEE2_join.fq, 74.2% matched 00:00 3.3Mb 0.0% Rows 00:01 146Mb 26.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEE2_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEE2_nonchimeric.fa, 96.0% matched Total reads: 137473 Total joined: 6358 Average join len: 14.58 Stdev join len: 4.55 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 69.3% passed 6358 FASTQ recs (6358) 4409 Converted (4409, 69.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 19Mb 4180 seqs, 1997 uniques, 1791 singletons (89.7%) 00:00 19Mb Min size 1, median 1, max 439, avg 2.09 00:00 19Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 19Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 6.5Mb Getting sizes 00:00 6.5Mb Sorting 206 sequences 00:00 6.5Mb 0.5% Writing output 00:00 6.5Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 26 OTUs, 3 chimeras (1.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 70.5% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 41.5% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 3.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/26 chimeras found (3.8%) 00:02 96Mb 3.8% Writing 25 non-chimeras 00:02 96Mb 100.0% Writing 25 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEE2_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching ESM5MEE2_join.fq, 74.2% matched 00:00 3.3Mb 0.0% Rows 00:01 46Mb 7.2% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEE2_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEE2_nonchimeric.fa, 96.0% matched Total reads: 137473 Total joined: 6358 Average join len: 14.58 Stdev join len: 4.55 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 69.3% passed 6358 FASTQ recs (6358) 4409 Converted (4409, 69.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_truncated.fa 00:00 19Mb 4180 seqs, 1997 uniques, 1791 singletons (89.7%) 00:00 19Mb Min size 1, median 1, max 439, avg 2.09 00:00 19Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 19Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_derep.fa 00:00 6.5Mb Getting sizes 00:00 6.5Mb Sorting 206 sequences 00:00 6.5Mb 0.5% Writing output 00:00 6.5Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 27 OTUs, 2 chimeras (1.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 99.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 27.3% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 3.6% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/27 chimeras found (3.7%) 00:02 96Mb 3.7% Writing 26 non-chimeras 00:02 96Mb 100.0% Writing 26 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEE2_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEE2_join.fq, 0.0% matched 00:01 55Mb 24.4% Searching ESM5MEE2_join.fq, 71.9% matched 00:01 55Mb 100.0% Searching ESM5MEE2_join.fq, 74.2% matched 00:00 3.3Mb 0.0% Rows 00:01 467Mb 85.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEE2_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEE2_nonchimeric.fa, 96.2% matched