Total reads: 215943 Total joined: 21114 Average join len: 15.18 Stdev join len: 4.09 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.7% passed 21114 FASTQ recs (21.1k) 13655 Converted (13.7k, 64.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 21Mb 12793 seqs, 5556 uniques, 4939 singletons (88.9%) 00:00 21Mb Min size 1, median 1, max 1252, avg 2.30 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 7.2Mb Getting sizes 00:00 7.2Mb Sorting 617 sequences 00:00 7.2Mb 0.2% Writing output 00:00 7.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 41 OTUs, 9 chimeras (1.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 80.4% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 73.5% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 2.4% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/41 chimeras found (0.0%) 00:02 96Mb 2.4% Writing 41 non-chimeras 00:02 96Mb 100.0% Writing 41 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEA_join.fq, 0.0% matched 00:01 55Mb 93.3% Searching ESM5MEEA_join.fq, 76.4% matched 00:01 55Mb 100.0% Searching ESM5MEEA_join.fq, 76.9% matched 00:00 3.3Mb 0.0% Rows 00:01 430Mb 76.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEEA_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEEA_nonchimeric.fa, 95.1% matched Total reads: 215943 Total joined: 21114 Average join len: 15.18 Stdev join len: 4.09 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.7% passed 21114 FASTQ recs (21.1k) 13655 Converted (13.7k, 64.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 21Mb 12793 seqs, 5556 uniques, 4939 singletons (88.9%) 00:00 21Mb Min size 1, median 1, max 1252, avg 2.30 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 7.2Mb Getting sizes 00:00 7.2Mb Sorting 617 sequences 00:00 7.2Mb 0.2% Writing output 00:00 7.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 41 OTUs, 9 chimeras (1.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 85.4% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 91.1% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 2.4% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/41 chimeras found (0.0%) 00:02 96Mb 2.4% Writing 41 non-chimeras 00:02 96Mb 100.0% Writing 41 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEA_join.fq, 0.0% matched 00:01 55Mb 81.2% Searching ESM5MEEA_join.fq, 76.5% matched 00:01 55Mb 100.0% Searching ESM5MEEA_join.fq, 76.9% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEEA_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEEA_nonchimeric.fa, 95.1% matched Total reads: 215943 Total joined: 21114 Average join len: 15.18 Stdev join len: 4.09 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.7% passed 21114 FASTQ recs (21.1k) 13655 Converted (13.7k, 64.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 21Mb 12793 seqs, 5556 uniques, 4939 singletons (88.9%) 00:00 21Mb Min size 1, median 1, max 1252, avg 2.30 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 7.2Mb Getting sizes 00:00 7.2Mb Sorting 617 sequences 00:00 7.2Mb 0.2% Writing output 00:00 7.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 41 OTUs, 9 chimeras (1.5%) 00:01 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:01 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:01 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 2.2% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 2.4% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/41 chimeras found (0.0%) 00:02 96Mb 2.4% Writing 41 non-chimeras 00:02 96Mb 100.0% Writing 41 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEA_join.fq, 0.0% matched 00:01 54Mb 8.1% Searching ESM5MEEA_join.fq, 86.7% matched 00:01 55Mb 100.0% Searching ESM5MEEA_join.fq, 76.9% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEEA_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching ESM5MEEA_nonchimeric.fa, 95.1% matched Total reads: 215943 Total joined: 21114 Average join len: 15.18 Stdev join len: 4.09 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 64.7% passed 21114 FASTQ recs (21.1k) 13655 Converted (13.7k, 64.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_truncated.fa 00:00 21Mb 12793 seqs, 5556 uniques, 4939 singletons (88.9%) 00:00 21Mb Min size 1, median 1, max 1252, avg 2.30 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_derep.fa 00:00 7.2Mb Getting sizes 00:00 7.2Mb Sorting 617 sequences 00:00 7.2Mb 0.2% Writing output 00:00 7.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 41 OTUs, 9 chimeras (1.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 26.6% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 41.5% Build index 00:03 82Mb 95.7% Build index 00:03 82Mb 100.0% Build index 00:03 94Mb 2.4% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/41 chimeras found (0.0%) 00:03 96Mb 2.4% Writing 41 non-chimeras 00:03 96Mb 100.0% Writing 41 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEA_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEA_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching ESM5MEEA_join.fq, 76.9% matched 00:00 3.3Mb 0.0% Rows 00:01 37Mb 5.2% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEEA_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEEA_nonchimeric.fa, 95.1% matched