Total reads: 287573 Total joined: 12264 Average join len: 7.40 Stdev join len: 3.66 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 75.8% passed 12264 FASTQ recs (12.3k) 9298 Converted (9298, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 20Mb 8830 seqs, 6711 uniques, 6403 singletons (95.4%) 00:00 20Mb Min size 1, median 1, max 433, avg 1.32 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:01 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:01 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:01 7.4Mb Getting sizes 00:01 7.4Mb Sorting 308 sequences 00:01 7.4Mb 0.3% Writing output 00:01 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 30 OTUs, 1 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 60.0% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 69.8% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 3.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/30 chimeras found (0.0%) 00:02 96Mb 3.3% Writing 30 non-chimeras 00:02 96Mb 100.0% Writing 30 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEG_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching ESM5MEEG_join.fq, 47.6% matched 00:00 3.3Mb 0.0% Rows 00:01 85Mb 14.7% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEEG_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEEG_nonchimeric.fa, 96.7% matched Total reads: 287573 Total joined: 12264 Average join len: 7.40 Stdev join len: 3.66 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 75.8% passed 12264 FASTQ recs (12.3k) 9298 Converted (9298, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 20Mb 8830 seqs, 6711 uniques, 6403 singletons (95.4%) 00:00 20Mb Min size 1, median 1, max 433, avg 1.32 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 308 sequences 00:00 7.4Mb 0.3% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 30 OTUs, 1 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 58.9% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 43.6% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 3.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/30 chimeras found (0.0%) 00:02 96Mb 3.3% Writing 30 non-chimeras 00:02 96Mb 100.0% Writing 30 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEG_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching ESM5MEEG_join.fq, 47.7% matched 00:00 3.3Mb 0.0% Rows 00:01 109Mb 18.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEEG_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching ESM5MEEG_nonchimeric.fa, 96.7% matched Total reads: 287573 Total joined: 12264 Average join len: 7.40 Stdev join len: 3.66 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 75.8% passed 12264 FASTQ recs (12.3k) 9298 Converted (9298, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 20Mb 8830 seqs, 6711 uniques, 6403 singletons (95.4%) 00:00 20Mb Min size 1, median 1, max 433, avg 1.32 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 308 sequences 00:00 7.4Mb 0.3% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 30 OTUs, 1 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 37.0% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 33.2% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 3.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/30 chimeras found (0.0%) 00:02 96Mb 3.3% Writing 30 non-chimeras 00:02 96Mb 100.0% Writing 30 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEG_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching ESM5MEEG_join.fq, 47.7% matched 00:01 3.3Mb 0.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEEG_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching ESM5MEEG_nonchimeric.fa, 96.7% matched Total reads: 287573 Total joined: 12264 Average join len: 7.40 Stdev join len: 3.66 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 75.8% passed 12264 FASTQ recs (12.3k) 9298 Converted (9298, 75.8%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_truncated.fa 00:00 20Mb 8830 seqs, 6711 uniques, 6403 singletons (95.4%) 00:00 20Mb Min size 1, median 1, max 433, avg 1.32 00:00 20Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 20Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 308 sequences 00:00 7.4Mb 0.3% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 30 OTUs, 1 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 6.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 11.6% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 3.2% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/30 chimeras found (0.0%) 00:02 96Mb 3.3% Writing 30 non-chimeras 00:02 96Mb 100.0% Writing 30 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEEG_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEEG_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching ESM5MEEG_join.fq, 47.5% matched 00:00 3.3Mb 0.0% Rows 00:01 385Mb 68.2% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEEG_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching ESM5MEEG_nonchimeric.fa, 96.7% matched