Total reads: 188528 Total joined: 23898 Average join len: 9.70 Stdev join len: 5.20 00:00 48Mb 0.1% Filtering 00:01 48Mb 0.2% Filtering, 0.0% passed 00:01 15Mb 100.0% Filtering, 74.1% passed 23898 FASTQ recs (23.9k) 17713 Converted (17.7k, 74.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 22Mb 16800 seqs, 9191 uniques, 8402 singletons (91.4%) 00:00 22Mb Min size 1, median 1, max 896, avg 1.83 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 8.0Mb Getting sizes 00:00 8.0Mb Sorting 789 sequences 00:00 8.0Mb 0.1% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 58 OTUs, 2 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 52Mb 57.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 4.6% Build index 00:03 82Mb 92.5% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 1.7% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/58 chimeras found (0.0%) 00:03 96Mb 1.7% Writing 58 non-chimeras 00:03 96Mb 100.0% Writing 58 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEET_join.fq, 0.0% matched 00:01 54Mb 91.6% Searching ESM5MEET_join.fq, 71.7% matched 00:01 54Mb 100.0% Searching ESM5MEET_join.fq, 72.4% matched 00:00 3.3Mb 0.0% Rows 00:01 447Mb 80.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEET_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEET_nonchimeric.fa, 96.6% matched Total reads: 188528 Total joined: 23898 Average join len: 9.70 Stdev join len: 5.20 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 74.1% passed 23898 FASTQ recs (23.9k) 17713 Converted (17.7k, 74.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 22Mb 16800 seqs, 9191 uniques, 8402 singletons (91.4%) 00:00 22Mb Min size 1, median 1, max 896, avg 1.83 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 8.0Mb Getting sizes 00:00 8.0Mb Sorting 789 sequences 00:00 8.0Mb 0.1% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 58 OTUs, 2 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 49.0% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 89.8% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/58 chimeras found (0.0%) 00:02 96Mb 1.7% Writing 58 non-chimeras 00:02 96Mb 100.0% Writing 58 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEET_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching ESM5MEET_join.fq, 72.4% matched 00:00 3.3Mb 0.0% Rows 00:01 68Mb 11.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching ESM5MEET_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching ESM5MEET_nonchimeric.fa, 96.6% matched Total reads: 188528 Total joined: 23898 Average join len: 9.70 Stdev join len: 5.20 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 74.1% passed 23898 FASTQ recs (23.9k) 17713 Converted (17.7k, 74.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 22Mb 16800 seqs, 9191 uniques, 8402 singletons (91.4%) 00:00 22Mb Min size 1, median 1, max 896, avg 1.83 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 8.0Mb Getting sizes 00:00 8.0Mb Sorting 789 sequences 00:00 8.0Mb 0.1% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 59 OTUs, 1 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 3.6% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 26.2% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/59 chimeras found (0.0%) 00:02 96Mb 1.7% Writing 59 non-chimeras 00:02 96Mb 100.0% Writing 59 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEET_join.fq, 0.0% matched 00:01 54Mb 16.6% Searching ESM5MEET_join.fq, 71.9% matched 00:02 54Mb 92.5% Searching ESM5MEET_join.fq, 71.3% matched 00:02 54Mb 100.0% Searching ESM5MEET_join.fq, 72.1% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:00 709Mb 0.1% Searching ESM5MEET_nonchimeric.fa, 0.0% matched 00:00 728Mb 100.0% Searching ESM5MEET_nonchimeric.fa, 96.6% matched Total reads: 188528 Total joined: 23898 Average join len: 9.70 Stdev join len: 5.20 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 74.1% passed 23898 FASTQ recs (23.9k) 17713 Converted (17.7k, 74.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_truncated.fa 00:00 22Mb 16800 seqs, 9191 uniques, 8402 singletons (91.4%) 00:00 22Mb Min size 1, median 1, max 896, avg 1.83 00:00 22Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 22Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_derep.fa 00:00 8.0Mb Getting sizes 00:00 8.0Mb Sorting 789 sequences 00:00 8.0Mb 0.1% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 46Mb 75.5% 52 OTUs, 1 chimeras (0.2%) 00:01 46Mb 100.0% 57 OTUs, 2 chimeras (0.3%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 69.8% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 52.3% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/57 chimeras found (0.0%) 00:02 96Mb 1.8% Writing 57 non-chimeras 00:02 96Mb 100.0% Writing 57 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/ESM5MEET_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching ESM5MEET_join.fq, 0.0% matched 00:01 54Mb 11.2% Searching ESM5MEET_join.fq, 76.7% matched 00:02 54Mb 79.1% Searching ESM5MEET_join.fq, 72.2% matched 00:02 54Mb 100.0% Searching ESM5MEET_join.fq, 72.0% matched 00:00 3.3Mb 0.0% Rows 00:01 363Mb 65.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching ESM5MEET_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching ESM5MEET_nonchimeric.fa, 96.5% matched