Total reads: 46398 Total joined: 1000 Average join len: 8.14 Stdev join len: 4.35 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 86.3% passed 1000 FASTQ recs (1000) 863 Converted (863, 86.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 18Mb 819 seqs, 420 uniques, 377 singletons (89.8%) 00:00 18Mb Min size 1, median 1, max 101, avg 1.95 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 43 sequences 00:00 6.1Mb 2.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 94.7% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 32.7% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBP_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBP_join.fq, 70.6% matched 00:00 3.3Mb 0.0% Rows 00:01 401Mb 70.9% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBP_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBP_nonchimeric.fa, 100.0% matched Total reads: 46398 Total joined: 1000 Average join len: 8.14 Stdev join len: 4.35 00:00 48Mb 0.1% Filtering 00:01 48Mb 71.3% Filtering, 80.8% passed 00:01 15Mb 100.0% Filtering, 86.3% passed 1000 FASTQ recs (1000) 863 Converted (863, 86.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 18Mb 819 seqs, 420 uniques, 377 singletons (89.8%) 00:00 18Mb Min size 1, median 1, max 101, avg 1.95 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 43 sequences 00:00 6.1Mb 2.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 89.9% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 94.4% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBP_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBP_join.fq, 70.6% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBP_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBP_nonchimeric.fa, 100.0% matched Total reads: 46398 Total joined: 1000 Average join len: 8.14 Stdev join len: 4.35 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 86.3% passed 1000 FASTQ recs (1000) 863 Converted (863, 86.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 18Mb 819 seqs, 420 uniques, 377 singletons (89.8%) 00:00 18Mb Min size 1, median 1, max 101, avg 1.95 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 43 sequences 00:00 6.1Mb 2.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 21.5% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 61.0% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBP_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBP_join.fq, 70.6% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBP_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBP_nonchimeric.fa, 100.0% matched Total reads: 46398 Total joined: 1000 Average join len: 8.14 Stdev join len: 4.35 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 86.3% passed 1000 FASTQ recs (1000) 863 Converted (863, 86.3%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_truncated.fa 00:00 18Mb 819 seqs, 420 uniques, 377 singletons (89.8%) 00:00 18Mb Min size 1, median 1, max 101, avg 1.95 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 43 sequences 00:00 6.1Mb 2.3% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 14 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 41.6% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 61.1% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 6.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/14 chimeras found (0.0%) 00:02 96Mb 7.1% Writing 14 non-chimeras 00:02 96Mb 100.0% Writing 14 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBP_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBP_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBP_join.fq, 70.6% matched 00:00 3.3Mb 0.0% Rows 00:01 268Mb 51.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching HSM5FZBP_nonchimeric.fa, 0.0% matched 00:03 727Mb 99.9% Searching HSM5FZBP_nonchimeric.fa, 100.0% matched 00:03 727Mb 100.0% Searching HSM5FZBP_nonchimeric.fa, 100.0% matched