Total reads: 149860 Total joined: 1394 Average join len: 7.31 Stdev join len: 3.51 00:00 49Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 91.4% passed 1394 FASTQ recs (1394) 1274 Converted (1274, 91.4%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 18Mb 1208 seqs, 560 uniques, 518 singletons (92.5%) 00:00 18Mb Min size 1, median 1, max 199, avg 2.16 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 42 sequences 00:00 6.1Mb 2.4% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 13 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 76.2% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 62.4% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 7.1% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/13 chimeras found (0.0%) 00:02 96Mb 7.7% Writing 13 non-chimeras 00:02 96Mb 100.0% Writing 13 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBR_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBR_join.fq, 69.5% matched 00:00 3.3Mb 0.0% Rows 00:01 97Mb 16.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching HSM5FZBR_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching HSM5FZBR_nonchimeric.fa, 100.0% matched Total reads: 149860 Total joined: 1394 Average join len: 7.31 Stdev join len: 3.51 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 91.4% passed 1394 FASTQ recs (1394) 1274 Converted (1274, 91.4%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 18Mb 1208 seqs, 560 uniques, 518 singletons (92.5%) 00:00 18Mb Min size 1, median 1, max 199, avg 2.16 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 42 sequences 00:00 6.1Mb 2.4% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 13 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 93.4% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:01 82Mb 100.0% Build index 00:01 94Mb 7.1% Search 0/1 chimeras found (0.0%) 00:01 96Mb 100.0% Search 0/13 chimeras found (0.0%) 00:01 96Mb 7.7% Writing 13 non-chimeras 00:01 96Mb 100.0% Writing 13 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBR_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBR_join.fq, 69.5% matched 00:00 3.3Mb 0.0% Rows 00:01 83Mb 14.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBR_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBR_nonchimeric.fa, 100.0% matched Total reads: 149860 Total joined: 1394 Average join len: 7.31 Stdev join len: 3.51 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 91.4% passed 1394 FASTQ recs (1394) 1274 Converted (1274, 91.4%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 18Mb 1208 seqs, 560 uniques, 518 singletons (92.5%) 00:00 18Mb Min size 1, median 1, max 199, avg 2.16 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 42 sequences 00:00 6.1Mb 2.4% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 13 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 55.4% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 85.1% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 7.1% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/13 chimeras found (0.0%) 00:02 96Mb 7.7% Writing 13 non-chimeras 00:02 96Mb 100.0% Writing 13 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBR_join.fq, 0.0% matched 00:00 55Mb 100.0% Searching HSM5FZBR_join.fq, 69.5% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:00 709Mb 0.1% Searching HSM5FZBR_nonchimeric.fa, 0.0% matched 00:00 727Mb 100.0% Searching HSM5FZBR_nonchimeric.fa, 100.0% matched Total reads: 149860 Total joined: 1394 Average join len: 7.31 Stdev join len: 3.51 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 91.4% passed 1394 FASTQ recs (1394) 1274 Converted (1274, 91.4%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_truncated.fa 00:00 18Mb 1208 seqs, 560 uniques, 518 singletons (92.5%) 00:00 18Mb Min size 1, median 1, max 199, avg 2.16 00:00 18Mb 0.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_derep.fa 00:00 6.1Mb Getting sizes 00:00 6.1Mb Sorting 42 sequences 00:00 6.1Mb 2.4% Writing output 00:00 6.1Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 13 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 39.3% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 25.5% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 7.1% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/13 chimeras found (0.0%) 00:02 96Mb 7.7% Writing 13 non-chimeras 00:02 96Mb 100.0% Writing 13 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBR_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBR_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBR_join.fq, 69.5% matched 00:00 3.3Mb 0.0% Rows 00:01 38Mb 5.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching HSM5FZBR_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching HSM5FZBR_nonchimeric.fa, 100.0% matched