Total reads: 421160 Total joined: 21267 Average join len: 9.87 Stdev join len: 5.25 00:00 48Mb 0.1% Filtering 00:01 48Mb 42.5% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 71.9% passed 21267 FASTQ recs (21.3k) 15282 Converted (15.3k, 71.9%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 21Mb 14488 seqs, 9053 uniques, 8450 singletons (93.3%) 00:00 21Mb Min size 1, median 1, max 725, avg 1.60 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 7.8Mb Getting sizes 00:00 8.0Mb Sorting 603 sequences 00:00 8.0Mb 0.2% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 36 OTUs, 3 chimeras (0.5%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 51Mb 51.4% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 1.0% Build index 00:03 82Mb 63.2% Build index 00:03 82Mb 100.0% Build index 00:03 94Mb 2.7% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 1/36 chimeras found (2.8%) 00:03 96Mb 2.8% Writing 35 non-chimeras 00:03 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBT_join.fq, 0.0% matched 00:01 54Mb 44.4% Searching HSM5FZBT_join.fq, 63.3% matched 00:01 54Mb 100.0% Searching HSM5FZBT_join.fq, 60.1% matched 00:00 3.3Mb 0.0% Rows 00:01 263Mb 50.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:03 709Mb 0.1% Searching HSM5FZBT_nonchimeric.fa, 0.0% matched 00:03 728Mb 100.0% Searching HSM5FZBT_nonchimeric.fa, 88.6% matched Total reads: 421160 Total joined: 21267 Average join len: 9.87 Stdev join len: 5.25 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 71.9% passed 21267 FASTQ recs (21.3k) 15282 Converted (15.3k, 71.9%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 21Mb 14488 seqs, 9053 uniques, 8450 singletons (93.3%) 00:00 21Mb Min size 1, median 1, max 725, avg 1.60 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 7.8Mb Getting sizes 00:00 8.0Mb Sorting 603 sequences 00:00 8.0Mb 0.2% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 4 chimeras (0.7%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 56Mb 85.5% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 8.8% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/35 chimeras found (2.9%) 00:02 96Mb 2.9% Writing 34 non-chimeras 00:02 96Mb 100.0% Writing 34 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBT_join.fq, 0.0% matched 00:01 54Mb 3.6% Searching HSM5FZBT_join.fq, 77.2% matched 00:02 55Mb 97.7% Searching HSM5FZBT_join.fq, 59.7% matched 00:02 55Mb 100.0% Searching HSM5FZBT_join.fq, 60.0% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:00 709Mb 0.1% Searching HSM5FZBT_nonchimeric.fa, 0.0% matched 00:00 728Mb 100.0% Searching HSM5FZBT_nonchimeric.fa, 88.2% matched Total reads: 421160 Total joined: 21267 Average join len: 9.87 Stdev join len: 5.25 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 71.9% passed 21267 FASTQ recs (21.3k) 15282 Converted (15.3k, 71.9%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 21Mb 14488 seqs, 9053 uniques, 8450 singletons (93.3%) 00:00 21Mb Min size 1, median 1, max 725, avg 1.60 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 7.8Mb Getting sizes 00:00 8.0Mb Sorting 603 sequences 00:00 8.0Mb 0.2% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 4 chimeras (0.7%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 22.8% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 29.9% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/35 chimeras found (2.9%) 00:02 96Mb 2.9% Writing 34 non-chimeras 00:02 96Mb 100.0% Writing 34 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBT_join.fq, 0.0% matched 00:01 54Mb 52.1% Searching HSM5FZBT_join.fq, 65.0% matched 00:01 55Mb 100.0% Searching HSM5FZBT_join.fq, 60.0% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBT_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching HSM5FZBT_nonchimeric.fa, 88.2% matched Total reads: 421160 Total joined: 21267 Average join len: 9.87 Stdev join len: 5.25 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 71.9% passed 21267 FASTQ recs (21.3k) 15282 Converted (15.3k, 71.9%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 43Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_truncated.fa 00:00 21Mb 14488 seqs, 9053 uniques, 8450 singletons (93.3%) 00:00 21Mb Min size 1, median 1, max 725, avg 1.60 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_derep.fa 00:00 7.8Mb Getting sizes 00:00 8.0Mb Sorting 603 sequences 00:00 8.0Mb 0.2% Writing output 00:00 8.0Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 4 chimeras (0.7%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 51Mb 55.8% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.2% Build index 00:03 82Mb 21.6% Build index 00:04 82Mb 88.2% Build index 00:04 82Mb 100.0% Build index 00:04 93Mb 2.8% Search 0/1 chimeras found (0.0%) 00:04 96Mb 100.0% Search 1/35 chimeras found (2.9%) 00:04 96Mb 2.9% Writing 34 non-chimeras 00:04 96Mb 100.0% Writing 34 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBT_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBT_join.fq, 0.0% matched 00:01 55Mb 91.0% Searching HSM5FZBT_join.fq, 59.1% matched 00:01 55Mb 100.0% Searching HSM5FZBT_join.fq, 60.0% matched 00:00 3.3Mb 0.0% Rows 00:01 512Mb 94.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBT_nonchimeric.fa, 0.0% matched 00:02 728Mb 97.3% Searching HSM5FZBT_nonchimeric.fa, 90.3% matched 00:02 728Mb 100.0% Searching HSM5FZBT_nonchimeric.fa, 88.2% matched