Total reads: 389872 Total joined: 18940 Average join len: 13.85 Stdev join len: 4.97 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 65.1% passed 18940 FASTQ recs (18.9k) 12323 Converted (12.3k, 65.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 21Mb 11690 seqs, 6499 uniques, 5966 singletons (91.8%) 00:00 21Mb Min size 1, median 1, max 736, avg 1.80 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 533 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 1 chimeras (0.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 56Mb 82.3% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 8.5% Build index 00:03 82Mb 80.7% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 2.8% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:03 96Mb 2.9% Writing 35 non-chimeras 00:03 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBU_join.fq, 0.0% matched 00:01 54Mb 63.8% Searching HSM5FZBU_join.fq, 71.7% matched 00:01 54Mb 100.0% Searching HSM5FZBU_join.fq, 69.4% matched 00:00 3.3Mb 0.0% Rows 00:01 263Mb 50.4% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching HSM5FZBU_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching HSM5FZBU_nonchimeric.fa, 97.1% matched Total reads: 389872 Total joined: 18940 Average join len: 13.85 Stdev join len: 4.97 00:00 47Mb 0.1% Filtering 00:01 48Mb 90.4% Filtering, 71.3% passed 00:01 15Mb 100.0% Filtering, 65.1% passed 18940 FASTQ recs (18.9k) 12323 Converted (12.3k, 65.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 21Mb 11690 seqs, 6499 uniques, 5966 singletons (91.8%) 00:00 21Mb Min size 1, median 1, max 736, avg 1.80 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 533 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 1 chimeras (0.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 35.5% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 43.4% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:02 96Mb 2.9% Writing 35 non-chimeras 00:02 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBU_join.fq, 0.0% matched 00:01 54Mb 39.1% Searching HSM5FZBU_join.fq, 73.4% matched 00:01 54Mb 100.0% Searching HSM5FZBU_join.fq, 69.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBU_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBU_nonchimeric.fa, 97.1% matched Total reads: 389872 Total joined: 18940 Average join len: 13.85 Stdev join len: 4.97 00:00 48Mb 0.1% Filtering 00:01 48Mb 88.5% Filtering, 72.8% passed 00:01 15Mb 100.0% Filtering, 65.1% passed 18940 FASTQ recs (18.9k) 12323 Converted (12.3k, 65.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 21Mb 11690 seqs, 6499 uniques, 5966 singletons (91.8%) 00:00 21Mb Min size 1, median 1, max 736, avg 1.80 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 533 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 1 chimeras (0.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 13.3% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 55.5% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 2.8% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/35 chimeras found (0.0%) 00:02 96Mb 2.9% Writing 35 non-chimeras 00:02 96Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBU_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5FZBU_join.fq, 69.4% matched 00:00 3.3Mb 0.0% Rows 00:01 6.2Mb 0.7% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBU_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBU_nonchimeric.fa, 97.1% matched Total reads: 389872 Total joined: 18940 Average join len: 13.85 Stdev join len: 4.97 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 65.1% passed 18940 FASTQ recs (18.9k) 12323 Converted (12.3k, 65.1%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 42Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_truncated.fa 00:00 21Mb 11690 seqs, 6499 uniques, 5966 singletons (91.8%) 00:00 21Mb Min size 1, median 1, max 736, avg 1.80 00:00 21Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 21Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 41Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_derep.fa 00:00 7.4Mb Getting sizes 00:00 7.4Mb Sorting 533 sequences 00:00 7.4Mb 0.2% Writing output 00:00 7.4Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 35 OTUs, 1 chimeras (0.2%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 23.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 13.7% Build index 00:03 82Mb 87.5% Build index 00:03 82Mb 100.0% Build index 00:03 94Mb 2.8% Search 0/1 chimeras found (0.0%) 00:03 97Mb 100.0% Search 0/35 chimeras found (0.0%) 00:03 97Mb 2.9% Writing 35 non-chimeras 00:03 97Mb 100.0% Writing 35 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5FZBU_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5FZBU_join.fq, 0.0% matched 00:01 54Mb 67.1% Searching HSM5FZBU_join.fq, 71.2% matched 00:01 54Mb 100.0% Searching HSM5FZBU_join.fq, 69.4% matched 00:00 3.3Mb 0.0% Rows 00:01 345Mb 63.2% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5FZBU_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5FZBU_nonchimeric.fa, 97.1% matched