Total reads: 201036 Total joined: 2681 Average join len: 11.24 Stdev join len: 5.47 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 77.7% passed 2681 FASTQ recs (2681) 2082 Converted (2082, 77.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 18Mb 1973 seqs, 1150 uniques, 1061 singletons (92.3%) 00:00 18Mb Min size 1, median 1, max 193, avg 1.72 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 89 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 18.3% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 42.6% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 5.9% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:02 96Mb 6.2% Writing 16 non-chimeras 00:02 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD7W_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5MD7W_join.fq, 63.4% matched 00:00 3.3Mb 0.0% Rows 00:01 43Mb 6.4% Rows 00:02 477Mb 88.0% Rows 00:02 532Mb 100.0% Rows 00:02 532Mb Reading pointers...done. 00:02 534Mb Reading seqs...done. 00:03 709Mb 0.1% Searching HSM5MD7W_nonchimeric.fa, 0.0% matched 00:03 727Mb 100.0% Searching HSM5MD7W_nonchimeric.fa, 100.0% matched Total reads: 201036 Total joined: 2681 Average join len: 11.24 Stdev join len: 5.47 00:00 47Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 77.7% passed 2681 FASTQ recs (2681) 2082 Converted (2082, 77.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 18Mb 1973 seqs, 1150 uniques, 1061 singletons (92.3%) 00:00 18Mb Min size 1, median 1, max 193, avg 1.72 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 89 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 1.8% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 9.6% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 5.9% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:02 96Mb 6.2% Writing 16 non-chimeras 00:02 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD7W_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5MD7W_join.fq, 63.4% matched 00:00 3.3Mb 0.0% Rows 00:01 82Mb 14.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5MD7W_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5MD7W_nonchimeric.fa, 100.0% matched Total reads: 201036 Total joined: 2681 Average join len: 11.24 Stdev join len: 5.47 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 77.7% passed 2681 FASTQ recs (2681) 2082 Converted (2082, 77.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 18Mb 1973 seqs, 1150 uniques, 1061 singletons (92.3%) 00:00 18Mb Min size 1, median 1, max 193, avg 1.72 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 89 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 17.6% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 67.4% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 5.9% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:02 96Mb 6.2% Writing 16 non-chimeras 00:02 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD7W_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5MD7W_join.fq, 63.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5MD7W_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching HSM5MD7W_nonchimeric.fa, 100.0% matched Total reads: 201036 Total joined: 2681 Average join len: 11.24 Stdev join len: 5.47 00:00 48Mb 0.1% Filtering 00:00 15Mb 100.0% Filtering, 77.7% passed 2681 FASTQ recs (2681) 2082 Converted (2082, 77.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_truncated.fa 00:00 18Mb 1973 seqs, 1150 uniques, 1061 singletons (92.3%) 00:00 18Mb Min size 1, median 1, max 193, avg 1.72 00:00 18Mb 0.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 18Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_derep.fa 00:00 6.2Mb Getting sizes 00:00 6.2Mb Sorting 89 sequences 00:00 6.2Mb 1.1% Writing output 00:00 6.2Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 45Mb 100.0% 16 OTUs, 0 chimeras (0.0%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:01 36Mb 7.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:01 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_raw_otus.fa 00:01 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:02 26Mb 92.4% Word stats 00:02 26Mb 100.0% Word stats 00:02 26Mb 100.0% Alloc rows 00:02 82Mb 0.1% Build index 00:03 82Mb 79.4% Build index 00:03 82Mb 100.0% Build index 00:03 95Mb 5.9% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/16 chimeras found (0.0%) 00:03 96Mb 6.2% Writing 16 non-chimeras 00:03 96Mb 100.0% Writing 16 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD7W_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD7W_join.fq, 0.0% matched 00:00 54Mb 100.0% Searching HSM5MD7W_join.fq, 63.5% matched 00:00 3.3Mb 0.0% Rows 00:01 353Mb 64.0% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching HSM5MD7W_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching HSM5MD7W_nonchimeric.fa, 100.0% matched