Total reads: 228938 Total joined: 158543 Average join len: 6.17 Stdev join len: 1.34 00:00 47Mb 0.1% Filtering 00:01 48Mb 15.6% Filtering, 100.0% passed 00:02 48Mb 59.8% Filtering, 100.0% passed 00:02 15Mb 100.0% Filtering, 79.5% passed 158543 FASTQ recs (158.5k) 126066 Converted (126.1k, 79.5%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:00 62Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:00 46Mb 119588 seqs, 65174 uniques, 60721 singletons (93.2%) 00:00 46Mb Min size 1, median 1, max 10133, avg 1.83 00:00 46Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 78.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 19Mb Getting sizes 00:00 19Mb Sorting 4453 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 57 OTUs, 5 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 48Mb 30.2% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.2% Build index 00:03 82Mb 37.6% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 1.7% Search 0/1 chimeras found (0.0%) 00:04 96Mb 56.9% Search 0/33 chimeras found (0.0%) 00:04 96Mb 100.0% Search 0/57 chimeras found (0.0%) 00:04 96Mb 1.8% Writing 57 non-chimeras 00:04 96Mb 100.0% Writing 57 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD86_join.fq, 0.0% matched 00:01 54Mb 15.0% Searching HSM5MD86_join.fq, 66.4% matched 00:02 54Mb 34.2% Searching HSM5MD86_join.fq, 62.2% matched 00:03 54Mb 59.7% Searching HSM5MD86_join.fq, 66.9% matched 00:04 54Mb 81.0% Searching HSM5MD86_join.fq, 64.2% matched 00:05 54Mb 99.3% Searching HSM5MD86_join.fq, 63.9% matched 00:05 54Mb 100.0% Searching HSM5MD86_join.fq, 63.9% matched 00:00 3.3Mb 0.0% Rows 00:01 399Mb 70.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5MD86_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching HSM5MD86_nonchimeric.fa, 31.6% matched Total reads: 228938 Total joined: 158543 Average join len: 6.17 Stdev join len: 1.34 00:00 48Mb 0.1% Filtering 00:01 48Mb 12.2% Filtering, 100.0% passed 00:02 15Mb 100.0% Filtering, 79.5% passed 158543 FASTQ recs (158.5k) 126066 Converted (126.1k, 79.5%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:00 62Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:00 46Mb 119588 seqs, 65174 uniques, 60721 singletons (93.2%) 00:00 46Mb Min size 1, median 1, max 10133, avg 1.83 00:00 46Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 93.8% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 19Mb Getting sizes 00:00 19Mb Sorting 4453 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 57 OTUs, 3 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 68.3% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 41.5% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/57 chimeras found (0.0%) 00:02 96Mb 1.8% Writing 57 non-chimeras 00:02 96Mb 100.0% Writing 57 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD86_join.fq, 0.0% matched 00:01 54Mb 3.7% Searching HSM5MD86_join.fq, 74.7% matched 00:02 54Mb 20.1% Searching HSM5MD86_join.fq, 64.7% matched 00:03 54Mb 35.2% Searching HSM5MD86_join.fq, 62.8% matched 00:04 54Mb 54.4% Searching HSM5MD86_join.fq, 67.4% matched 00:05 54Mb 69.9% Searching HSM5MD86_join.fq, 65.4% matched 00:06 54Mb 85.1% Searching HSM5MD86_join.fq, 64.4% matched 00:06 54Mb 100.0% Searching HSM5MD86_join.fq, 64.0% matched 00:00 3.3Mb 0.0% Rows 00:01 13Mb 1.8% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5MD86_nonchimeric.fa, 0.0% matched 00:02 728Mb 56.4% Searching HSM5MD86_nonchimeric.fa, 43.3% matched 00:02 728Mb 100.0% Searching HSM5MD86_nonchimeric.fa, 33.3% matched Total reads: 228938 Total joined: 158543 Average join len: 6.17 Stdev join len: 1.34 00:00 48Mb 0.1% Filtering 00:01 48Mb 45.1% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 79.5% passed 158543 FASTQ recs (158.5k) 126066 Converted (126.1k, 79.5%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:01 50Mb 47.2% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:01 62Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:01 46Mb 119588 seqs, 65174 uniques, 60721 singletons (93.2%) 00:01 46Mb Min size 1, median 1, max 10133, avg 1.83 00:01 46Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 19Mb Getting sizes 00:00 19Mb Sorting 4453 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 45Mb 42.3% 17 OTUs, 1 chimeras (0.1%) 00:01 46Mb 100.0% 57 OTUs, 5 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 70.7% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 87.3% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 1.7% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 0/57 chimeras found (0.0%) 00:02 96Mb 1.8% Writing 57 non-chimeras 00:02 96Mb 100.0% Writing 57 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD86_join.fq, 0.0% matched 00:01 54Mb 18.8% Searching HSM5MD86_join.fq, 64.9% matched 00:02 54Mb 45.1% Searching HSM5MD86_join.fq, 65.9% matched 00:03 54Mb 70.7% Searching HSM5MD86_join.fq, 65.1% matched 00:04 54Mb 94.9% Searching HSM5MD86_join.fq, 63.5% matched 00:04 54Mb 100.0% Searching HSM5MD86_join.fq, 63.9% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:00 709Mb 0.1% Searching HSM5MD86_nonchimeric.fa, 0.0% matched 00:00 728Mb 100.0% Searching HSM5MD86_nonchimeric.fa, 31.6% matched Total reads: 228938 Total joined: 158543 Average join len: 6.17 Stdev join len: 1.34 00:00 47Mb 0.1% Filtering 00:01 48Mb 35.0% Filtering, 100.0% passed 00:02 15Mb 100.0% Filtering, 79.5% passed 158543 FASTQ recs (158.5k) 126066 Converted (126.1k, 79.5%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:00 62Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_truncated.fa 00:00 46Mb 119588 seqs, 65174 uniques, 60721 singletons (93.2%) 00:00 46Mb Min size 1, median 1, max 10133, avg 1.83 00:00 46Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 48.3% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:01 46Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_derep.fa 00:00 19Mb Getting sizes 00:00 19Mb Sorting 4453 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 57 OTUs, 3 chimeras (0.1%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 48Mb 36.3% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 3.0% Build index 00:03 82Mb 98.0% Build index 00:03 82Mb 100.0% Build index 00:03 95Mb 1.7% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 0/57 chimeras found (0.0%) 00:03 96Mb 1.8% Writing 57 non-chimeras 00:03 96Mb 100.0% Writing 57 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/HSM5MD86_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching HSM5MD86_join.fq, 0.0% matched 00:01 54Mb 18.5% Searching HSM5MD86_join.fq, 64.9% matched 00:02 54Mb 41.8% Searching HSM5MD86_join.fq, 64.7% matched 00:03 54Mb 65.8% Searching HSM5MD86_join.fq, 65.9% matched 00:04 54Mb 87.3% Searching HSM5MD86_join.fq, 64.3% matched 00:04 54Mb 100.0% Searching HSM5MD86_join.fq, 63.9% matched 00:00 3.3Mb 0.0% Rows 00:01 234Mb 43.9% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching HSM5MD86_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching HSM5MD86_nonchimeric.fa, 33.3% matched