Total reads: 479347 Total joined: 169305 Average join len: 7.23 Stdev join len: 3.47 00:00 48Mb 0.1% Filtering 00:01 48Mb 27.5% Filtering, 100.0% passed 00:02 15Mb 100.0% Filtering, 76.6% passed 169305 FASTQ recs (169.3k) 129707 Converted (129.7k, 76.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 47Mb 30.8% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 63Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 47Mb 122961 seqs, 76204 uniques, 71862 singletons (94.3%) 00:01 47Mb Min size 1, median 1, max 6057, avg 1.61 00:01 47Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 47Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 55Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 21Mb Getting sizes 00:01 22Mb Sorting 4342 sequences 00:01 22Mb 0.0% Writing output 00:01 22Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 76 OTUs, 41 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 48Mb 31.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 3.2% Build index 00:03 82Mb 90.4% Build index 00:03 82Mb 100.0% Build index 00:03 95Mb 1.3% Search 0/1 chimeras found (0.0%) 00:03 97Mb 100.0% Search 1/76 chimeras found (1.3%) 00:03 97Mb 1.3% Writing 75 non-chimeras 00:03 97Mb 100.0% Writing 75 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9Q_join.fq, 0.0% matched 00:01 55Mb 13.3% Searching MSM5FZ9Q_join.fq, 59.4% matched 00:02 55Mb 29.6% Searching MSM5FZ9Q_join.fq, 54.8% matched 00:03 55Mb 51.5% Searching MSM5FZ9Q_join.fq, 62.0% matched 00:04 55Mb 67.7% Searching MSM5FZ9Q_join.fq, 58.9% matched 00:05 55Mb 84.7% Searching MSM5FZ9Q_join.fq, 57.7% matched 00:05 55Mb 100.0% Searching MSM5FZ9Q_join.fq, 57.5% matched 00:00 3.3Mb 0.0% Rows 00:01 61Mb 10.2% Rows 00:02 528Mb 98.4% Rows 00:02 532Mb 100.0% Rows 00:02 532Mb Reading pointers...done. 00:02 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching MSM5FZ9Q_nonchimeric.fa, 0.0% matched 00:02 728Mb 100.0% Searching MSM5FZ9Q_nonchimeric.fa, 65.3% matched Total reads: 479347 Total joined: 169305 Average join len: 7.23 Stdev join len: 3.47 00:00 48Mb 0.1% Filtering 00:01 48Mb 10.3% Filtering, 100.0% passed 00:02 15Mb 100.0% Filtering, 76.6% passed 169305 FASTQ recs (169.3k) 129707 Converted (129.7k, 76.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:00 63Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:00 47Mb 122961 seqs, 76204 uniques, 71862 singletons (94.3%) 00:00 47Mb Min size 1, median 1, max 6057, avg 1.61 00:00 47Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 47Mb 87.3% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 47Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 55Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 21Mb Getting sizes 00:00 22Mb Sorting 4342 sequences 00:00 22Mb 0.0% Writing output 00:00 22Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 46Mb 78.9% 68 OTUs, 32 chimeras (0.9%) 00:01 46Mb 100.0% 75 OTUs, 40 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 61.8% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 67.7% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 1.3% Search 0/1 chimeras found (0.0%) 00:02 97Mb 100.0% Search 1/75 chimeras found (1.3%) 00:02 97Mb 1.3% Writing 74 non-chimeras 00:02 97Mb 100.0% Writing 74 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9Q_join.fq, 0.0% matched 00:01 54Mb 12.8% Searching MSM5FZ9Q_join.fq, 60.4% matched 00:02 54Mb 31.4% Searching MSM5FZ9Q_join.fq, 54.9% matched 00:03 54Mb 54.5% Searching MSM5FZ9Q_join.fq, 61.8% matched 00:04 54Mb 72.1% Searching MSM5FZ9Q_join.fq, 58.1% matched 00:05 54Mb 91.2% Searching MSM5FZ9Q_join.fq, 56.8% matched 00:05 54Mb 100.0% Searching MSM5FZ9Q_join.fq, 57.4% matched 00:00 3.3Mb 0.0% Rows 00:00 532Mb 100.0% Rows 00:00 532Mb Reading pointers...done. 00:00 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching MSM5FZ9Q_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching MSM5FZ9Q_nonchimeric.fa, 66.2% matched Total reads: 479347 Total joined: 169305 Average join len: 7.23 Stdev join len: 3.47 00:00 48Mb 0.1% Filtering 00:01 48Mb 35.2% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 76.6% passed 169305 FASTQ recs (169.3k) 129707 Converted (129.7k, 76.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 53Mb 55.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 63Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 47Mb 122961 seqs, 76204 uniques, 71862 singletons (94.3%) 00:01 47Mb Min size 1, median 1, max 6057, avg 1.61 00:01 47Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 47Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 55Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 21Mb Getting sizes 00:01 22Mb Sorting 4342 sequences 00:01 22Mb 0.0% Writing output 00:01 22Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 75 OTUs, 40 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 1.4% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 52.1% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.3% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/75 chimeras found (1.3%) 00:02 96Mb 1.3% Writing 74 non-chimeras 00:02 96Mb 100.0% Writing 74 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9Q_join.fq, 0.0% matched 00:01 54Mb 3.4% Searching MSM5FZ9Q_join.fq, 72.5% matched 00:02 54Mb 13.9% Searching MSM5FZ9Q_join.fq, 59.2% matched 00:03 54Mb 23.4% Searching MSM5FZ9Q_join.fq, 54.9% matched 00:04 54Mb 33.9% Searching MSM5FZ9Q_join.fq, 55.4% matched 00:05 54Mb 46.8% Searching MSM5FZ9Q_join.fq, 60.8% matched 00:06 54Mb 57.9% Searching MSM5FZ9Q_join.fq, 61.0% matched 00:07 54Mb 68.7% Searching MSM5FZ9Q_join.fq, 58.5% matched 00:08 54Mb 80.2% Searching MSM5FZ9Q_join.fq, 57.0% matched 00:09 54Mb 93.2% Searching MSM5FZ9Q_join.fq, 56.7% matched 00:09 54Mb 100.0% Searching MSM5FZ9Q_join.fq, 57.2% matched 00:00 3.3Mb 0.0% Rows 00:01 465Mb 85.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching MSM5FZ9Q_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching MSM5FZ9Q_nonchimeric.fa, 66.2% matched Total reads: 479347 Total joined: 169305 Average join len: 7.23 Stdev join len: 3.47 00:00 48Mb 0.1% Filtering 00:01 48Mb 61.3% Filtering, 98.1% passed 00:01 15Mb 100.0% Filtering, 76.6% passed 169305 FASTQ recs (169.3k) 129707 Converted (129.7k, 76.6%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 42Mb 9.5% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 63Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_truncated.fa 00:01 47Mb 122961 seqs, 76204 uniques, 71862 singletons (94.3%) 00:01 47Mb Min size 1, median 1, max 6057, avg 1.61 00:01 47Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 47Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 36Mb 0.2% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 55Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_derep.fa 00:01 21Mb Getting sizes 00:01 22Mb Sorting 4342 sequences 00:01 22Mb 0.0% Writing output 00:01 22Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 77 OTUs, 40 chimeras (0.9%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 51Mb 55.8% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.8% Build index 00:03 82Mb 96.9% Build index 00:03 82Mb 100.0% Build index 00:03 95Mb 1.3% Search 0/1 chimeras found (0.0%) 00:03 97Mb 100.0% Search 1/77 chimeras found (1.3%) 00:03 97Mb 1.3% Writing 76 non-chimeras 00:03 97Mb 100.0% Writing 76 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9Q_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9Q_join.fq, 0.0% matched 00:01 54Mb 15.1% Searching MSM5FZ9Q_join.fq, 59.4% matched 00:02 54Mb 32.2% Searching MSM5FZ9Q_join.fq, 55.8% matched 00:03 54Mb 53.7% Searching MSM5FZ9Q_join.fq, 62.1% matched 00:04 54Mb 69.4% Searching MSM5FZ9Q_join.fq, 58.8% matched 00:05 54Mb 86.0% Searching MSM5FZ9Q_join.fq, 57.6% matched 00:05 54Mb 100.0% Searching MSM5FZ9Q_join.fq, 57.6% matched 00:00 3.3Mb 0.0% Rows 00:01 136Mb 24.3% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching MSM5FZ9Q_nonchimeric.fa, 0.0% matched 00:02 728Mb 100.0% Searching MSM5FZ9Q_nonchimeric.fa, 64.5% matched