Total reads: 512826 Total joined: 134462 Average join len: 7.37 Stdev join len: 3.62 00:00 48Mb 0.1% Filtering 00:01 48Mb 0.2% Filtering, 0.0% passed 00:02 48Mb 77.7% Filtering, 96.1% passed 00:02 15Mb 100.0% Filtering, 75.7% passed 134462 FASTQ recs (134.5k) 101750 Converted (101.8k, 75.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:00 40Mb 96395 seqs, 63941 uniques, 60557 singletons (94.7%) 00:00 40Mb Min size 1, median 1, max 4142, avg 1.51 00:00 40Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 25.5% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 18Mb Getting sizes 00:00 19Mb Sorting 3384 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 46Mb 94.0% 59 OTUs, 20 chimeras (0.6%) 00:01 46Mb 100.0% 61 OTUs, 21 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 73.8% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 65.7% Build index 00:02 82Mb 100.0% Build index 00:02 95Mb 1.6% Search 0/1 chimeras found (0.0%) 00:02 97Mb 100.0% Search 1/61 chimeras found (1.6%) 00:02 97Mb 1.6% Writing 60 non-chimeras 00:02 97Mb 100.0% Writing 60 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9S_join.fq, 0.0% matched 00:01 54Mb 11.2% Searching MSM5FZ9S_join.fq, 57.7% matched 00:02 54Mb 34.2% Searching MSM5FZ9S_join.fq, 52.6% matched 00:03 54Mb 59.9% Searching MSM5FZ9S_join.fq, 57.4% matched 00:04 54Mb 80.6% Searching MSM5FZ9S_join.fq, 54.5% matched 00:04 54Mb 100.0% Searching MSM5FZ9S_join.fq, 54.0% matched 00:00 3.3Mb 0.0% Rows 00:01 49Mb 7.9% Rows 00:02 510Mb 93.4% Rows 00:02 532Mb 100.0% Rows 00:02 532Mb Reading pointers...done. 00:02 534Mb Reading seqs...done. 00:03 709Mb 0.1% Searching MSM5FZ9S_nonchimeric.fa, 0.0% matched 00:03 727Mb 100.0% Searching MSM5FZ9S_nonchimeric.fa, 58.3% matched Total reads: 512826 Total joined: 134462 Average join len: 7.37 Stdev join len: 3.62 00:00 47Mb 0.1% Filtering 00:01 48Mb 18.5% Filtering, 100.0% passed 00:02 15Mb 100.0% Filtering, 75.7% passed 134462 FASTQ recs (134.5k) 101750 Converted (101.8k, 75.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:00 40Mb 96395 seqs, 63941 uniques, 60557 singletons (94.7%) 00:00 40Mb Min size 1, median 1, max 4142, avg 1.51 00:00 40Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 81.1% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 18Mb Getting sizes 00:00 19Mb Sorting 3384 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 62 OTUs, 21 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 69.6% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 33.1% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.6% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/62 chimeras found (1.6%) 00:02 96Mb 1.6% Writing 61 non-chimeras 00:02 96Mb 100.0% Writing 61 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9S_join.fq, 0.0% matched 00:01 53Mb 0.2% Searching MSM5FZ9S_join.fq, 73.4% matched 00:02 54Mb 16.8% Searching MSM5FZ9S_join.fq, 54.1% matched 00:03 54Mb 31.6% Searching MSM5FZ9S_join.fq, 51.6% matched 00:04 54Mb 47.4% Searching MSM5FZ9S_join.fq, 57.9% matched 00:05 54Mb 63.2% Searching MSM5FZ9S_join.fq, 56.5% matched 00:06 54Mb 77.3% Searching MSM5FZ9S_join.fq, 54.3% matched 00:07 54Mb 93.5% Searching MSM5FZ9S_join.fq, 53.3% matched 00:07 54Mb 100.0% Searching MSM5FZ9S_join.fq, 53.9% matched 00:00 3.3Mb 0.0% Rows 00:01 269Mb 51.1% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching MSM5FZ9S_nonchimeric.fa, 0.0% matched 00:02 728Mb 72.4% Searching MSM5FZ9S_nonchimeric.fa, 76.2% matched 00:02 728Mb 100.0% Searching MSM5FZ9S_nonchimeric.fa, 57.4% matched Total reads: 512826 Total joined: 134462 Average join len: 7.37 Stdev join len: 3.62 00:00 47Mb 0.1% Filtering 00:01 48Mb 42.5% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 75.7% passed 134462 FASTQ recs (134.5k) 101750 Converted (101.8k, 75.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:00 40Mb 96395 seqs, 63941 uniques, 60557 singletons (94.7%) 00:00 40Mb Min size 1, median 1, max 4142, avg 1.51 00:00 40Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 1.2% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 18Mb Getting sizes 00:00 19Mb Sorting 3384 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 64 OTUs, 21 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 44Mb 7.8% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:01 25Mb 0.1% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.2% Build index 00:03 82Mb 82.7% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 1.5% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 1/64 chimeras found (1.6%) 00:03 96Mb 1.6% Writing 63 non-chimeras 00:03 96Mb 100.0% Writing 63 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9S_join.fq, 0.0% matched 00:01 54Mb 7.8% Searching MSM5FZ9S_join.fq, 60.8% matched 00:02 54Mb 22.9% Searching MSM5FZ9S_join.fq, 51.6% matched 00:03 54Mb 41.4% Searching MSM5FZ9S_join.fq, 56.1% matched 00:04 54Mb 57.2% Searching MSM5FZ9S_join.fq, 58.0% matched 00:05 54Mb 71.3% Searching MSM5FZ9S_join.fq, 55.0% matched 00:06 54Mb 87.6% Searching MSM5FZ9S_join.fq, 53.9% matched 00:06 54Mb 100.0% Searching MSM5FZ9S_join.fq, 54.0% matched 00:00 3.3Mb 0.0% Rows 00:01 295Mb 55.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching MSM5FZ9S_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching MSM5FZ9S_nonchimeric.fa, 55.6% matched Total reads: 512826 Total joined: 134462 Average join len: 7.37 Stdev join len: 3.62 00:00 47Mb 0.1% Filtering 00:01 48Mb 41.7% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 75.7% passed 134462 FASTQ recs (134.5k) 101750 Converted (101.8k, 75.7%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:01 51Mb 62.9% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:01 58Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_truncated.fa 00:01 40Mb 96395 seqs, 63941 uniques, 60557 singletons (94.7%) 00:01 40Mb Min size 1, median 1, max 4142, avg 1.51 00:01 40Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:01 40Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 52Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_derep.fa 00:00 18Mb Getting sizes 00:00 19Mb Sorting 3384 sequences 00:00 19Mb 0.0% Writing output 00:00 19Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 62 OTUs, 21 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 41.6% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 46.9% Build index 00:02 82Mb 100.0% Build index 00:02 93Mb 1.6% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 1/62 chimeras found (1.6%) 00:02 96Mb 1.6% Writing 61 non-chimeras 00:02 96Mb 100.0% Writing 61 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5FZ9S_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5FZ9S_join.fq, 0.0% matched 00:01 54Mb 4.1% Searching MSM5FZ9S_join.fq, 67.1% matched 00:02 54Mb 18.2% Searching MSM5FZ9S_join.fq, 53.4% matched 00:03 54Mb 31.5% Searching MSM5FZ9S_join.fq, 51.6% matched 00:04 54Mb 45.7% Searching MSM5FZ9S_join.fq, 57.6% matched 00:05 54Mb 59.8% Searching MSM5FZ9S_join.fq, 57.3% matched 00:06 54Mb 72.2% Searching MSM5FZ9S_join.fq, 54.6% matched 00:07 54Mb 95.0% Searching MSM5FZ9S_join.fq, 53.4% matched 00:07 54Mb 100.0% Searching MSM5FZ9S_join.fq, 53.9% matched 00:00 3.3Mb 0.0% Rows 00:01 505Mb 92.2% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching MSM5FZ9S_nonchimeric.fa, 0.0% matched 00:01 728Mb 100.0% Searching MSM5FZ9S_nonchimeric.fa, 57.4% matched