Total reads: 267812 Total joined: 94402 Average join len: 6.83 Stdev join len: 2.91 00:00 48Mb 0.1% Filtering 00:01 48Mb 0.2% Filtering, 0.0% passed 00:02 15Mb 100.0% Filtering, 77.0% passed 94402 FASTQ recs (94.4k) 72658 Converted (72.7k, 77.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:01 46Mb 44.6% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:01 54Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:01 35Mb 68965 seqs, 46361 uniques, 44043 singletons (95.0%) 00:01 35Mb Min size 1, median 1, max 5861, avg 1.49 00:01 35Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:01 35Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 49Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 16Mb Getting sizes 00:00 16Mb Sorting 2318 sequences 00:00 16Mb 0.0% Writing output 00:00 16Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:01 46Mb 77.7% 40 OTUs, 13 chimeras (0.7%) 00:01 46Mb 100.0% 47 OTUs, 15 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 72.2% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 57.1% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 2.1% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 2/47 chimeras found (4.3%) 00:02 96Mb 2.1% Writing 45 non-chimeras 00:02 96Mb 100.0% Writing 45 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5LLE5_join.fq, 0.0% matched 00:01 54Mb 8.2% Searching MSM5LLE5_join.fq, 60.7% matched 00:02 54Mb 38.9% Searching MSM5LLE5_join.fq, 54.1% matched 00:03 54Mb 65.5% Searching MSM5LLE5_join.fq, 55.6% matched 00:04 54Mb 95.3% Searching MSM5LLE5_join.fq, 53.8% matched 00:04 54Mb 100.0% Searching MSM5LLE5_join.fq, 54.4% matched 00:00 3.3Mb 0.0% Rows 00:01 358Mb 64.9% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching MSM5LLE5_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching MSM5LLE5_nonchimeric.fa, 64.4% matched Total reads: 267812 Total joined: 94402 Average join len: 6.83 Stdev join len: 2.91 00:00 48Mb 0.1% Filtering 00:01 48Mb 62.5% Filtering, 96.8% passed 00:01 15Mb 100.0% Filtering, 77.0% passed 94402 FASTQ recs (94.4k) 72658 Converted (72.7k, 77.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:00 54Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:00 35Mb 68965 seqs, 46361 uniques, 44043 singletons (95.0%) 00:00 35Mb Min size 1, median 1, max 5861, avg 1.49 00:00 35Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 35Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 49Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 16Mb Getting sizes 00:01 16Mb Sorting 2318 sequences 00:01 16Mb 0.0% Writing output 00:01 16Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 47 OTUs, 15 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 74.6% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 64.6% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 2.1% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 2/47 chimeras found (4.3%) 00:02 96Mb 2.1% Writing 45 non-chimeras 00:02 96Mb 100.0% Writing 45 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5LLE5_join.fq, 0.0% matched 00:01 55Mb 19.6% Searching MSM5LLE5_join.fq, 52.3% matched 00:02 55Mb 55.9% Searching MSM5LLE5_join.fq, 58.2% matched 00:03 55Mb 87.5% Searching MSM5LLE5_join.fq, 53.7% matched 00:03 55Mb 100.0% Searching MSM5LLE5_join.fq, 54.4% matched 00:00 3.3Mb 0.0% Rows 00:01 119Mb 20.5% Rows 00:02 293Mb 55.0% Rows 00:03 495Mb 91.2% Rows 00:03 532Mb 100.0% Rows 00:03 532Mb Reading pointers...done. 00:03 534Mb Reading seqs...done. 00:03 709Mb 0.1% Searching MSM5LLE5_nonchimeric.fa, 0.0% matched 00:03 727Mb 100.0% Searching MSM5LLE5_nonchimeric.fa, 64.4% matched Total reads: 267812 Total joined: 94402 Average join len: 6.83 Stdev join len: 2.91 00:00 48Mb 0.1% Filtering 00:01 15Mb 100.0% Filtering, 77.0% passed 94402 FASTQ recs (94.4k) 72658 Converted (72.7k, 77.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:01 51Mb 82.4% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:01 54Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:01 35Mb 68965 seqs, 46361 uniques, 44043 singletons (95.0%) 00:01 35Mb Min size 1, median 1, max 5861, avg 1.49 00:01 35Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:01 35Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 49Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 16Mb Getting sizes 00:00 16Mb Sorting 2318 sequences 00:00 16Mb 0.0% Writing output 00:00 16Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 47 OTUs, 15 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:01 25Mb 5.9% Masking 00:01 25Mb 100.0% Masking 00:01 26Mb 0.1% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 16.2% Build index 00:02 82Mb 100.0% Build index 00:02 94Mb 2.1% Search 0/1 chimeras found (0.0%) 00:02 96Mb 100.0% Search 2/47 chimeras found (4.3%) 00:02 96Mb 2.1% Writing 45 non-chimeras 00:02 96Mb 100.0% Writing 45 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5LLE5_join.fq, 0.0% matched 00:01 55Mb 6.3% Searching MSM5LLE5_join.fq, 65.6% matched 00:02 55Mb 43.2% Searching MSM5LLE5_join.fq, 56.1% matched 00:03 55Mb 76.8% Searching MSM5LLE5_join.fq, 53.6% matched 00:03 55Mb 100.0% Searching MSM5LLE5_join.fq, 54.4% matched 00:00 3.3Mb 0.0% Rows 00:01 350Mb 63.6% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:01 709Mb 0.1% Searching MSM5LLE5_nonchimeric.fa, 0.0% matched 00:01 727Mb 100.0% Searching MSM5LLE5_nonchimeric.fa, 64.4% matched Total reads: 267812 Total joined: 94402 Average join len: 6.83 Stdev join len: 2.91 00:00 48Mb 0.1% Filtering 00:01 48Mb 55.6% Filtering, 100.0% passed 00:01 15Mb 100.0% Filtering, 77.0% passed 94402 FASTQ recs (94.4k) 72658 Converted (72.7k, 77.0%) usearch v8.0.1623_i86linux32, 4.0Gb RAM (8.1Gb total), 2 cores (C) Copyright 2013-15 Robert C. Edgar, all rights reserved. http://drive5.com/usearch Licensed to: abualiga@gmail.com 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:00 54Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_truncated.fa 00:00 35Mb 68965 seqs, 46361 uniques, 44043 singletons (95.0%) 00:00 35Mb Min size 1, median 1, max 5861, avg 1.49 00:00 35Mb 0.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 35Mb 100.0% Writing /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:01 44Mb 48.9% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:01 49Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_derep.fa 00:01 16Mb Getting sizes 00:01 16Mb Sorting 2318 sequences 00:01 16Mb 0.0% Writing output 00:01 16Mb 100.0% Writing output 00:00 38Mb 0.1% 0 OTUs, 0 chimeras (0.0%) 00:00 46Mb 100.0% 47 OTUs, 15 chimeras (0.6%) 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_raw_otus.fa 00:00 40Mb 0.1% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 58Mb 100.0% Reading /seq/ibdmdb/centos6/var/lib/uchime/gold.fa 00:00 25Mb 0.1% Masking 00:00 25Mb 100.0% Masking 00:00 26Mb 0.1% Word stats 00:01 26Mb 29.8% Word stats 00:01 26Mb 100.0% Word stats 00:01 26Mb 100.0% Alloc rows 00:01 82Mb 0.1% Build index 00:02 82Mb 0.8% Build index 00:03 82Mb 98.4% Build index 00:03 82Mb 100.0% Build index 00:03 93Mb 2.1% Search 0/1 chimeras found (0.0%) 00:03 96Mb 100.0% Search 2/47 chimeras found (4.3%) 00:03 96Mb 2.1% Writing 45 non-chimeras 00:03 96Mb 100.0% Writing 45 non-chimeras 00:00 36Mb 0.1% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 40Mb 100.0% Reading /seq/ibdmdb/processing/HMP2/16S/1547/rschwager/anadama_products/MSM5LLE5_nonchimeric.fa 00:00 6.1Mb 0.1% Masking 00:00 6.1Mb 100.0% Masking 00:00 6.9Mb 0.1% Word stats 00:00 6.9Mb 100.0% Word stats 00:00 6.9Mb 100.0% Alloc rows 00:00 6.9Mb 0.1% Build index 00:00 6.9Mb 100.0% Build index 00:00 40Mb 0.1% Searching MSM5LLE5_join.fq, 0.0% matched 00:01 55Mb 26.9% Searching MSM5LLE5_join.fq, 49.6% matched 00:02 55Mb 56.7% Searching MSM5LLE5_join.fq, 58.0% matched 00:03 55Mb 80.3% Searching MSM5LLE5_join.fq, 53.5% matched 00:03 55Mb 100.0% Searching MSM5LLE5_join.fq, 54.4% matched 00:00 3.3Mb 0.0% Rows 00:01 146Mb 26.5% Rows 00:01 532Mb 100.0% Rows 00:01 532Mb Reading pointers...done. 00:01 534Mb Reading seqs...done. 00:02 709Mb 0.1% Searching MSM5LLE5_nonchimeric.fa, 0.0% matched 00:02 727Mb 100.0% Searching MSM5LLE5_nonchimeric.fa, 64.4% matched